Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim16Q99PP9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim16Q99PP9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim16Q99PP9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim16Q99PP9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim16Q99PP9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim16Q99PP9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Trim16Q99PP9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim16Q99PP9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim16Q99PP9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim16Q99PP9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trim16Q99PP9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim16Q99PP9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim16Q99PP9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim16Q99PP9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim16Q99PP9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim16Q99PP9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim16Q99PP9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim16Q99PP9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim16Q99PP9 Gm22567-201ENSMUST00000175542 342 ntBASIC20.51■□□□□ 0.87
Trim16Q99PP9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim16Q99PP9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim16Q99PP9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Trim16Q99PP9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim16Q99PP9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim16Q99PP9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim16Q99PP9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim16Q99PP9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim16Q99PP9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim16Q99PP9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim16Q99PP9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim16Q99PP9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim16Q99PP9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim16Q99PP9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim16Q99PP9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim16Q99PP9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim16Q99PP9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim16Q99PP9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim16Q99PP9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim16Q99PP9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trim16Q99PP9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Trim16Q99PP9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.43■□□□□ 0.86
Trim16Q99PP9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim16Q99PP9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim16Q99PP9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim16Q99PP9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim16Q99PP9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trim16Q99PP9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim16Q99PP9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms