Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Pcdh15Q99PJ1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
Pcdh15Q99PJ1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh15Q99PJ1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh15Q99PJ1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdh15Q99PJ1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdh15Q99PJ1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Pcdh15Q99PJ1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
Pcdh15Q99PJ1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.84■■□□□ 1.57
Pcdh15Q99PJ1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdh15Q99PJ1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Pcdh15Q99PJ1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Pcdh15Q99PJ1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdh15Q99PJ1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdh15Q99PJ1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24.83■■□□□ 1.57
Pcdh15Q99PJ1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Pcdh15Q99PJ1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdh15Q99PJ1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdh15Q99PJ1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdh15Q99PJ1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.82■■□□□ 1.56
Pcdh15Q99PJ1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
Pcdh15Q99PJ1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC24.82■■□□□ 1.56
Pcdh15Q99PJ1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdh15Q99PJ1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdh15Q99PJ1 Mir7075-201ENSMUST00000184187 82 ntBASIC24.81■■□□□ 1.56
Pcdh15Q99PJ1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC24.81■■□□□ 1.56
Pcdh15Q99PJ1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdh15Q99PJ1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Gm43173-201ENSMUST00000202246 593 ntBASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdh15Q99PJ1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC24.79■■□□□ 1.56
Pcdh15Q99PJ1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Pcdh15Q99PJ1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdh15Q99PJ1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdh15Q99PJ1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdh15Q99PJ1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdh15Q99PJ1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdh15Q99PJ1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.78■■□□□ 1.56
Pcdh15Q99PJ1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdh15Q99PJ1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Pcdh15Q99PJ1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.77■■□□□ 1.56
Pcdh15Q99PJ1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh15Q99PJ1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh15Q99PJ1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Pcdh15Q99PJ1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.77■■□□□ 1.56
Pcdh15Q99PJ1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdh15Q99PJ1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh15Q99PJ1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh15Q99PJ1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh15Q99PJ1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh15Q99PJ1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdh15Q99PJ1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.76■■□□□ 1.55
Pcdh15Q99PJ1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Pcdh15Q99PJ1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh15Q99PJ1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh15Q99PJ1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh15Q99PJ1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdh15Q99PJ1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Gm5874-201ENSMUST00000096101 508 ntBASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.74■■□□□ 1.55
Pcdh15Q99PJ1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC24.73■■□□□ 1.55
Pcdh15Q99PJ1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdh15Q99PJ1 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.72■■□□□ 1.55
Pcdh15Q99PJ1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh15Q99PJ1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh15Q99PJ1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdh15Q99PJ1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdh15Q99PJ1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Pcdh15Q99PJ1 Gm7291-201ENSMUST00000199147 382 ntBASIC24.71■■□□□ 1.55
Pcdh15Q99PJ1 Spcs1-207ENSMUST00000228767 1008 ntBASIC24.71■■□□□ 1.55
Pcdh15Q99PJ1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.7■■□□□ 1.54
Pcdh15Q99PJ1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdh15Q99PJ1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdh15Q99PJ1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC24.69■■□□□ 1.54
Pcdh15Q99PJ1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Wdr70-203ENSMUST00000227371 1130 ntBASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdh15Q99PJ1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms