Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trex1Q91XB0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.55■■□□□ 1.52
Trex1Q91XB0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trex1Q91XB0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trex1Q91XB0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC24.54■■□□□ 1.52
Trex1Q91XB0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trex1Q91XB0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.54■■□□□ 1.52
Trex1Q91XB0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.54■■□□□ 1.52
Trex1Q91XB0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.54■■□□□ 1.52
Trex1Q91XB0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trex1Q91XB0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.54■■□□□ 1.52
Trex1Q91XB0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Trex1Q91XB0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.54■■□□□ 1.52
Trex1Q91XB0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trex1Q91XB0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trex1Q91XB0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Trex1Q91XB0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trex1Q91XB0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trex1Q91XB0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trex1Q91XB0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trex1Q91XB0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trex1Q91XB0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trex1Q91XB0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trex1Q91XB0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.51■■□□□ 1.51
Trex1Q91XB0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trex1Q91XB0 Golgb1-201ENSMUST00000023534 498 ntBASIC24.51■■□□□ 1.51
Trex1Q91XB0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trex1Q91XB0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Trex1Q91XB0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trex1Q91XB0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Trex1Q91XB0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Trex1Q91XB0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trex1Q91XB0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.5■■□□□ 1.51
Trex1Q91XB0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trex1Q91XB0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Trex1Q91XB0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.5■■□□□ 1.51
Trex1Q91XB0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.5■■□□□ 1.51
Trex1Q91XB0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trex1Q91XB0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trex1Q91XB0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trex1Q91XB0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trex1Q91XB0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trex1Q91XB0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Trex1Q91XB0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.48■■□□□ 1.51
Trex1Q91XB0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trex1Q91XB0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.48■■□□□ 1.51
Trex1Q91XB0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trex1Q91XB0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trex1Q91XB0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trex1Q91XB0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Trex1Q91XB0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trex1Q91XB0 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.47■■□□□ 1.51
Trex1Q91XB0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trex1Q91XB0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trex1Q91XB0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trex1Q91XB0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trex1Q91XB0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Trex1Q91XB0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trex1Q91XB0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trex1Q91XB0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trex1Q91XB0 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.46■■□□□ 1.51
Trex1Q91XB0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trex1Q91XB0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Trex1Q91XB0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Trex1Q91XB0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Trex1Q91XB0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.45■■□□□ 1.5
Trex1Q91XB0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trex1Q91XB0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trex1Q91XB0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trex1Q91XB0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Trex1Q91XB0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.44■■□□□ 1.5
Trex1Q91XB0 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.44■■□□□ 1.5
Trex1Q91XB0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trex1Q91XB0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trex1Q91XB0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Trex1Q91XB0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trex1Q91XB0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC24.43■■□□□ 1.5
Trex1Q91XB0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.43■■□□□ 1.5
Trex1Q91XB0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trex1Q91XB0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trex1Q91XB0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
Trex1Q91XB0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trex1Q91XB0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trex1Q91XB0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.42■■□□□ 1.5
Trex1Q91XB0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trex1Q91XB0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trex1Q91XB0 Gm27454-201ENSMUST00000185090 204 ntBASIC24.42■■□□□ 1.5
Trex1Q91XB0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Trex1Q91XB0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trex1Q91XB0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trex1Q91XB0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.41■■□□□ 1.5
Trex1Q91XB0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trex1Q91XB0 Gm12821-201ENSMUST00000120022 600 ntBASIC24.41■■□□□ 1.5
Trex1Q91XB0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.41■■□□□ 1.5
Trex1Q91XB0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trex1Q91XB0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trex1Q91XB0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.41■■□□□ 1.5
Trex1Q91XB0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
Trex1Q91XB0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trex1Q91XB0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms