Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
StrcQ8VIM6 Gm26571-201ENSMUST00000181399 666 ntBASIC26.2■■□□□ 1.78
StrcQ8VIM6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
StrcQ8VIM6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
StrcQ8VIM6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
StrcQ8VIM6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
StrcQ8VIM6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
StrcQ8VIM6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
StrcQ8VIM6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
StrcQ8VIM6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
StrcQ8VIM6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
StrcQ8VIM6 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.17■■□□□ 1.78
StrcQ8VIM6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
StrcQ8VIM6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
StrcQ8VIM6 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC26.15■■□□□ 1.78
StrcQ8VIM6 Gm43173-201ENSMUST00000202246 593 ntBASIC26.15■■□□□ 1.78
StrcQ8VIM6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
StrcQ8VIM6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
StrcQ8VIM6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
StrcQ8VIM6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
StrcQ8VIM6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
StrcQ8VIM6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
StrcQ8VIM6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
StrcQ8VIM6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
StrcQ8VIM6 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.13■■□□□ 1.77
StrcQ8VIM6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
StrcQ8VIM6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
StrcQ8VIM6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
StrcQ8VIM6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
StrcQ8VIM6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
StrcQ8VIM6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.12■■□□□ 1.77
StrcQ8VIM6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC26.12■■□□□ 1.77
StrcQ8VIM6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
StrcQ8VIM6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.12■■□□□ 1.77
StrcQ8VIM6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
StrcQ8VIM6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
StrcQ8VIM6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
StrcQ8VIM6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
StrcQ8VIM6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
StrcQ8VIM6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC26.09■■□□□ 1.77
StrcQ8VIM6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
StrcQ8VIM6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
StrcQ8VIM6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.08■■□□□ 1.77
StrcQ8VIM6 Mir7075-201ENSMUST00000184187 82 ntBASIC26.08■■□□□ 1.77
StrcQ8VIM6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
StrcQ8VIM6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
StrcQ8VIM6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.08■■□□□ 1.76
StrcQ8VIM6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC26.07■■□□□ 1.76
StrcQ8VIM6 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC26.07■■□□□ 1.76
StrcQ8VIM6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC26.07■■□□□ 1.76
StrcQ8VIM6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
StrcQ8VIM6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
StrcQ8VIM6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
StrcQ8VIM6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
StrcQ8VIM6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
StrcQ8VIM6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
StrcQ8VIM6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
StrcQ8VIM6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
StrcQ8VIM6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
StrcQ8VIM6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
StrcQ8VIM6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
StrcQ8VIM6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
StrcQ8VIM6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC26.04■■□□□ 1.76
StrcQ8VIM6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.04■■□□□ 1.76
StrcQ8VIM6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
StrcQ8VIM6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
StrcQ8VIM6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
StrcQ8VIM6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.03■■□□□ 1.76
StrcQ8VIM6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
StrcQ8VIM6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
StrcQ8VIM6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
StrcQ8VIM6 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
StrcQ8VIM6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
StrcQ8VIM6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
StrcQ8VIM6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
StrcQ8VIM6 Gm5874-201ENSMUST00000096101 508 ntBASIC26.02■■□□□ 1.76
StrcQ8VIM6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.01■■□□□ 1.76
StrcQ8VIM6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
StrcQ8VIM6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC26■■□□□ 1.75
StrcQ8VIM6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC26■■□□□ 1.75
StrcQ8VIM6 Gm10657-201ENSMUST00000193528 1031 ntBASIC26■■□□□ 1.75
StrcQ8VIM6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26■■□□□ 1.75
StrcQ8VIM6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC26■■□□□ 1.75
StrcQ8VIM6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC26■■□□□ 1.75
StrcQ8VIM6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
StrcQ8VIM6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms