Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Rab40bQ8VHP8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rab40bQ8VHP8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab40bQ8VHP8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rab40bQ8VHP8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Rab40bQ8VHP8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.02■□□□□ 0.64
Rab40bQ8VHP8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rab40bQ8VHP8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
Rab40bQ8VHP8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rab40bQ8VHP8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40bQ8VHP8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rab40bQ8VHP8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40bQ8VHP8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40bQ8VHP8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40bQ8VHP8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40bQ8VHP8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Rab40bQ8VHP8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Rab40bQ8VHP8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19■□□□□ 0.63
Rab40bQ8VHP8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40bQ8VHP8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.99■□□□□ 0.63
Rab40bQ8VHP8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40bQ8VHP8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rab40bQ8VHP8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rab40bQ8VHP8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40bQ8VHP8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rab40bQ8VHP8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40bQ8VHP8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.97■□□□□ 0.63
Rab40bQ8VHP8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.96■□□□□ 0.63
Rab40bQ8VHP8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40bQ8VHP8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab40bQ8VHP8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Rab40bQ8VHP8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab40bQ8VHP8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Rab40bQ8VHP8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rab40bQ8VHP8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rab40bQ8VHP8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.94■□□□□ 0.62
Rab40bQ8VHP8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40bQ8VHP8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40bQ8VHP8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40bQ8VHP8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40bQ8VHP8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rab40bQ8VHP8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab40bQ8VHP8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms