Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Slf1Q8R3P9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slf1Q8R3P9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Slf1Q8R3P9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slf1Q8R3P9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slf1Q8R3P9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slf1Q8R3P9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Slf1Q8R3P9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slf1Q8R3P9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slf1Q8R3P9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.25■□□□□ 0.99
Slf1Q8R3P9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slf1Q8R3P9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slf1Q8R3P9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slf1Q8R3P9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slf1Q8R3P9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Slf1Q8R3P9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slf1Q8R3P9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slf1Q8R3P9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slf1Q8R3P9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Slf1Q8R3P9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slf1Q8R3P9 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.23■□□□□ 0.99
Slf1Q8R3P9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.23■□□□□ 0.99
Slf1Q8R3P9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slf1Q8R3P9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
Slf1Q8R3P9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.21■□□□□ 0.99
Slf1Q8R3P9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slf1Q8R3P9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slf1Q8R3P9 Gm22567-201ENSMUST00000175542 342 ntBASIC21.21■□□□□ 0.99
Slf1Q8R3P9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slf1Q8R3P9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slf1Q8R3P9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slf1Q8R3P9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Slf1Q8R3P9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slf1Q8R3P9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slf1Q8R3P9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slf1Q8R3P9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slf1Q8R3P9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slf1Q8R3P9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slf1Q8R3P9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slf1Q8R3P9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slf1Q8R3P9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Slf1Q8R3P9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Slf1Q8R3P9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slf1Q8R3P9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slf1Q8R3P9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slf1Q8R3P9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slf1Q8R3P9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.17■□□□□ 0.98
Slf1Q8R3P9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slf1Q8R3P9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slf1Q8R3P9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Slf1Q8R3P9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slf1Q8R3P9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.16■□□□□ 0.98
Slf1Q8R3P9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slf1Q8R3P9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Slf1Q8R3P9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Slf1Q8R3P9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slf1Q8R3P9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slf1Q8R3P9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slf1Q8R3P9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slf1Q8R3P9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Slf1Q8R3P9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.14■□□□□ 0.97
Slf1Q8R3P9 Terc-201ENSMUST00000082862 423 ntBASIC21.14■□□□□ 0.97
Slf1Q8R3P9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.14■□□□□ 0.97
Slf1Q8R3P9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slf1Q8R3P9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.13■□□□□ 0.97
Slf1Q8R3P9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slf1Q8R3P9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slf1Q8R3P9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Slf1Q8R3P9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slf1Q8R3P9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms