Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxe1Q8R2I0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Foxe1Q8R2I0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
Foxe1Q8R2I0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Foxe1Q8R2I0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.22■■□□□ 1.15
Foxe1Q8R2I0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Foxe1Q8R2I0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.22■■□□□ 1.15
Foxe1Q8R2I0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Foxe1Q8R2I0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxe1Q8R2I0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Foxe1Q8R2I0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Foxe1Q8R2I0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Foxe1Q8R2I0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Foxe1Q8R2I0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxe1Q8R2I0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxe1Q8R2I0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxe1Q8R2I0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Gm8493-201ENSMUST00000196881 489 ntBASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxe1Q8R2I0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Foxe1Q8R2I0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxe1Q8R2I0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.18■■□□□ 1.14
Foxe1Q8R2I0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxe1Q8R2I0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.18■■□□□ 1.14
Foxe1Q8R2I0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.18■■□□□ 1.14
Foxe1Q8R2I0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Foxe1Q8R2I0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.16■■□□□ 1.14
Foxe1Q8R2I0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Foxe1Q8R2I0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
Foxe1Q8R2I0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxe1Q8R2I0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxe1Q8R2I0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxe1Q8R2I0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Foxe1Q8R2I0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Foxe1Q8R2I0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC22.14■■□□□ 1.13
Foxe1Q8R2I0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Foxe1Q8R2I0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Foxe1Q8R2I0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Gm9870-201ENSMUST00000063874 645 ntBASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxe1Q8R2I0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxe1Q8R2I0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Foxe1Q8R2I0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxe1Q8R2I0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxe1Q8R2I0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxe1Q8R2I0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Foxe1Q8R2I0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxe1Q8R2I0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Foxe1Q8R2I0 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.11■■□□□ 1.13
Foxe1Q8R2I0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxe1Q8R2I0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Gm27405-201ENSMUST00000184201 112 ntBASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxe1Q8R2I0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxe1Q8R2I0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxe1Q8R2I0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Foxe1Q8R2I0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Foxe1Q8R2I0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Foxe1Q8R2I0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Foxe1Q8R2I0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxe1Q8R2I0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Foxe1Q8R2I0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Foxe1Q8R2I0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Foxe1Q8R2I0 Gm42569-201ENSMUST00000200539 472 ntBASIC22.06■■□□□ 1.12
Foxe1Q8R2I0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms