Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nudcd3Q8R1N4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nudcd3Q8R1N4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
Nudcd3Q8R1N4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nudcd3Q8R1N4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nudcd3Q8R1N4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nudcd3Q8R1N4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nudcd3Q8R1N4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nudcd3Q8R1N4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Nudcd3Q8R1N4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nudcd3Q8R1N4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nudcd3Q8R1N4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nudcd3Q8R1N4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.08■□□□□ 0.97
Nudcd3Q8R1N4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nudcd3Q8R1N4 Notumos-201ENSMUST00000151998 2659 ntBASIC21.08■□□□□ 0.97
Nudcd3Q8R1N4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nudcd3Q8R1N4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nudcd3Q8R1N4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.07■□□□□ 0.96
Nudcd3Q8R1N4 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.07■□□□□ 0.96
Nudcd3Q8R1N4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nudcd3Q8R1N4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nudcd3Q8R1N4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nudcd3Q8R1N4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nudcd3Q8R1N4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nudcd3Q8R1N4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nudcd3Q8R1N4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nudcd3Q8R1N4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nudcd3Q8R1N4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Nudcd3Q8R1N4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Nudcd3Q8R1N4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nudcd3Q8R1N4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Nudcd3Q8R1N4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nudcd3Q8R1N4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.02■□□□□ 0.96
Nudcd3Q8R1N4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nudcd3Q8R1N4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nudcd3Q8R1N4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nudcd3Q8R1N4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nudcd3Q8R1N4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nudcd3Q8R1N4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Nudcd3Q8R1N4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nudcd3Q8R1N4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.98■□□□□ 0.95
Nudcd3Q8R1N4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nudcd3Q8R1N4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nudcd3Q8R1N4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nudcd3Q8R1N4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nudcd3Q8R1N4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nudcd3Q8R1N4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.97■□□□□ 0.95
Nudcd3Q8R1N4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nudcd3Q8R1N4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nudcd3Q8R1N4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.97■□□□□ 0.95
Nudcd3Q8R1N4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nudcd3Q8R1N4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms