Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sf3a1Q8K4Z5 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.95■■□□□ 1.74
Sf3a1Q8K4Z5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
Sf3a1Q8K4Z5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sf3a1Q8K4Z5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.94■■□□□ 1.74
Sf3a1Q8K4Z5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sf3a1Q8K4Z5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Sf3a1Q8K4Z5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Sf3a1Q8K4Z5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Sf3a1Q8K4Z5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Sf3a1Q8K4Z5 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sf3a1Q8K4Z5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC25.91■■□□□ 1.74
Sf3a1Q8K4Z5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sf3a1Q8K4Z5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Sf3a1Q8K4Z5 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.9■■□□□ 1.74
Sf3a1Q8K4Z5 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.9■■□□□ 1.74
Sf3a1Q8K4Z5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Sf3a1Q8K4Z5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sf3a1Q8K4Z5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Sf3a1Q8K4Z5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Sf3a1Q8K4Z5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Sf3a1Q8K4Z5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Sf3a1Q8K4Z5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Sf3a1Q8K4Z5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.89■■□□□ 1.73
Sf3a1Q8K4Z5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Gm10232-201ENSMUST00000089221 720 ntBASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Sf3a1Q8K4Z5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sf3a1Q8K4Z5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sf3a1Q8K4Z5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC25.87■■□□□ 1.73
Sf3a1Q8K4Z5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Sf3a1Q8K4Z5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sf3a1Q8K4Z5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sf3a1Q8K4Z5 Gm15546-201ENSMUST00000122095 826 ntBASIC25.86■■□□□ 1.73
Sf3a1Q8K4Z5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sf3a1Q8K4Z5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sf3a1Q8K4Z5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sf3a1Q8K4Z5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sf3a1Q8K4Z5 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.85■■□□□ 1.73
Sf3a1Q8K4Z5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Sf3a1Q8K4Z5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sf3a1Q8K4Z5 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sf3a1Q8K4Z5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sf3a1Q8K4Z5 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sf3a1Q8K4Z5 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC25.85■■□□□ 1.73
Sf3a1Q8K4Z5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sf3a1Q8K4Z5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sf3a1Q8K4Z5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sf3a1Q8K4Z5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sf3a1Q8K4Z5 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.84■■□□□ 1.73
Sf3a1Q8K4Z5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Sf3a1Q8K4Z5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Sf3a1Q8K4Z5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sf3a1Q8K4Z5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sf3a1Q8K4Z5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.83■■□□□ 1.73
Sf3a1Q8K4Z5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.83■■□□□ 1.73
Sf3a1Q8K4Z5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Sf3a1Q8K4Z5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sf3a1Q8K4Z5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Sf3a1Q8K4Z5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Sf3a1Q8K4Z5 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Gm15820-201ENSMUST00000201566 728 ntBASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sf3a1Q8K4Z5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.81■■□□□ 1.72
Sf3a1Q8K4Z5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sf3a1Q8K4Z5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sf3a1Q8K4Z5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sf3a1Q8K4Z5 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.81■■□□□ 1.72
Sf3a1Q8K4Z5 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.81■■□□□ 1.72
Sf3a1Q8K4Z5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.81■■□□□ 1.72
Sf3a1Q8K4Z5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Sf3a1Q8K4Z5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Sf3a1Q8K4Z5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Sf3a1Q8K4Z5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sf3a1Q8K4Z5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Sf3a1Q8K4Z5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms