Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip4Q8CI96 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip4Q8CI96 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Clip4Q8CI96 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip4Q8CI96 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip4Q8CI96 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
Clip4Q8CI96 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip4Q8CI96 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Clip4Q8CI96 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.16■□□□□ 0.98
Clip4Q8CI96 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip4Q8CI96 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.15■□□□□ 0.98
Clip4Q8CI96 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip4Q8CI96 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Clip4Q8CI96 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.14■□□□□ 0.98
Clip4Q8CI96 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Clip4Q8CI96 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Clip4Q8CI96 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Clip4Q8CI96 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Clip4Q8CI96 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
Clip4Q8CI96 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Clip4Q8CI96 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Clip4Q8CI96 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip4Q8CI96 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Clip4Q8CI96 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.13■□□□□ 0.97
Clip4Q8CI96 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Clip4Q8CI96 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip4Q8CI96 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Clip4Q8CI96 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip4Q8CI96 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clip4Q8CI96 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Gm45444-201ENSMUST00000211394 898 ntBASIC21.12■□□□□ 0.97
Clip4Q8CI96 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clip4Q8CI96 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clip4Q8CI96 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip4Q8CI96 Gm13238-201ENSMUST00000117655 780 ntBASIC21.11■□□□□ 0.97
Clip4Q8CI96 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Clip4Q8CI96 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip4Q8CI96 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip4Q8CI96 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clip4Q8CI96 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Gm43566-201ENSMUST00000196851 808 ntBASIC21.1■□□□□ 0.97
Clip4Q8CI96 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clip4Q8CI96 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Clip4Q8CI96 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
Clip4Q8CI96 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip4Q8CI96 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip4Q8CI96 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip4Q8CI96 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Clip4Q8CI96 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Clip4Q8CI96 Gm5812-201ENSMUST00000061073 957 ntBASIC21.09■□□□□ 0.97
Clip4Q8CI96 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip4Q8CI96 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip4Q8CI96 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Clip4Q8CI96 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Clip4Q8CI96 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clip4Q8CI96 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clip4Q8CI96 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clip4Q8CI96 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Clip4Q8CI96 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Clip4Q8CI96 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Clip4Q8CI96 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clip4Q8CI96 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clip4Q8CI96 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.07■□□□□ 0.96
Clip4Q8CI96 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Clip4Q8CI96 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clip4Q8CI96 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clip4Q8CI96 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clip4Q8CI96 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clip4Q8CI96 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clip4Q8CI96 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.06■□□□□ 0.96
Clip4Q8CI96 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clip4Q8CI96 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clip4Q8CI96 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clip4Q8CI96 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms