Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ShfQ8CG80 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShfQ8CG80 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShfQ8CG80 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShfQ8CG80 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ShfQ8CG80 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShfQ8CG80 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShfQ8CG80 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ShfQ8CG80 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ShfQ8CG80 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ShfQ8CG80 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
ShfQ8CG80 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShfQ8CG80 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShfQ8CG80 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ShfQ8CG80 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShfQ8CG80 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ShfQ8CG80 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShfQ8CG80 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ShfQ8CG80 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
ShfQ8CG80 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShfQ8CG80 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ShfQ8CG80 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ShfQ8CG80 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShfQ8CG80 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.89■□□□□ 0.61
ShfQ8CG80 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShfQ8CG80 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ShfQ8CG80 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShfQ8CG80 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ShfQ8CG80 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShfQ8CG80 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ShfQ8CG80 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ShfQ8CG80 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ShfQ8CG80 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ShfQ8CG80 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ShfQ8CG80 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ShfQ8CG80 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.88■□□□□ 0.61
ShfQ8CG80 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.88■□□□□ 0.61
ShfQ8CG80 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShfQ8CG80 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShfQ8CG80 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShfQ8CG80 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShfQ8CG80 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.86■□□□□ 0.61
ShfQ8CG80 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ShfQ8CG80 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
ShfQ8CG80 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ShfQ8CG80 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShfQ8CG80 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShfQ8CG80 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.85■□□□□ 0.61
ShfQ8CG80 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShfQ8CG80 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
ShfQ8CG80 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShfQ8CG80 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ShfQ8CG80 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ShfQ8CG80 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShfQ8CG80 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShfQ8CG80 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.83■□□□□ 0.61
ShfQ8CG80 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ShfQ8CG80 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ShfQ8CG80 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ShfQ8CG80 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.83■□□□□ 0.6
ShfQ8CG80 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ShfQ8CG80 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.82■□□□□ 0.6
ShfQ8CG80 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShfQ8CG80 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ShfQ8CG80 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShfQ8CG80 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ShfQ8CG80 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.81■□□□□ 0.6
ShfQ8CG80 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.81■□□□□ 0.6
ShfQ8CG80 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.81■□□□□ 0.6
ShfQ8CG80 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.81■□□□□ 0.6
ShfQ8CG80 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.81■□□□□ 0.6
ShfQ8CG80 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.81■□□□□ 0.6
ShfQ8CG80 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShfQ8CG80 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShfQ8CG80 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.8■□□□□ 0.6
ShfQ8CG80 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.8■□□□□ 0.6
ShfQ8CG80 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShfQ8CG80 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShfQ8CG80 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShfQ8CG80 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShfQ8CG80 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.79■□□□□ 0.6
ShfQ8CG80 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShfQ8CG80 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms