Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Col6a6Q8C6K9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Gm29257-201ENSMUST00000186115 639 ntBASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Col6a6Q8C6K9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Col6a6Q8C6K9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.24■□□□□ 0.67
Col6a6Q8C6K9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col6a6Q8C6K9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.24■□□□□ 0.67
Col6a6Q8C6K9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col6a6Q8C6K9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col6a6Q8C6K9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col6a6Q8C6K9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Col6a6Q8C6K9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.23■□□□□ 0.67
Col6a6Q8C6K9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.23■□□□□ 0.67
Col6a6Q8C6K9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col6a6Q8C6K9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col6a6Q8C6K9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Col6a6Q8C6K9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.23■□□□□ 0.67
Col6a6Q8C6K9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col6a6Q8C6K9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Col6a6Q8C6K9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Col6a6Q8C6K9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col6a6Q8C6K9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Col6a6Q8C6K9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col6a6Q8C6K9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col6a6Q8C6K9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Col6a6Q8C6K9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col6a6Q8C6K9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Col6a6Q8C6K9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col6a6Q8C6K9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Gm5874-201ENSMUST00000096101 508 ntBASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col6a6Q8C6K9 Gm26571-201ENSMUST00000181399 666 ntBASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col6a6Q8C6K9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a6Q8C6K9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms