Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ckap4Q8BMK4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Gm27502-201ENSMUST00000183495 199 ntBASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ckap4Q8BMK4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap4Q8BMK4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap4Q8BMK4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.88■□□□□ 0.77
Ckap4Q8BMK4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ckap4Q8BMK4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ckap4Q8BMK4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Gm14523-201ENSMUST00000117260 558 ntBASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ckap4Q8BMK4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.86■□□□□ 0.77
Ckap4Q8BMK4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap4Q8BMK4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap4Q8BMK4 Gm7332-201ENSMUST00000118351 454 ntBASIC19.86■□□□□ 0.77
Ckap4Q8BMK4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ckap4Q8BMK4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ckap4Q8BMK4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ckap4Q8BMK4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ckap4Q8BMK4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Ckap4Q8BMK4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap4Q8BMK4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap4Q8BMK4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap4Q8BMK4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.84■□□□□ 0.77
Ckap4Q8BMK4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ckap4Q8BMK4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap4Q8BMK4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.83■□□□□ 0.77
Ckap4Q8BMK4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ckap4Q8BMK4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap4Q8BMK4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap4Q8BMK4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.83■□□□□ 0.77
Ckap4Q8BMK4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ckap4Q8BMK4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.83■□□□□ 0.76
Ckap4Q8BMK4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap4Q8BMK4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ckap4Q8BMK4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ckap4Q8BMK4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ckap4Q8BMK4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Gm12366-201ENSMUST00000121722 873 ntBASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Gm5786-201ENSMUST00000085368 882 ntBASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ckap4Q8BMK4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms