Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Pcdh20Q8BIZ0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcdh20Q8BIZ0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Pcdh20Q8BIZ0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh20Q8BIZ0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh20Q8BIZ0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh20Q8BIZ0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdh20Q8BIZ0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdh20Q8BIZ0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdh20Q8BIZ0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.52■□□□□ 0.87
Pcdh20Q8BIZ0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdh20Q8BIZ0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pcdh20Q8BIZ0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh20Q8BIZ0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh20Q8BIZ0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh20Q8BIZ0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh20Q8BIZ0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh20Q8BIZ0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdh20Q8BIZ0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdh20Q8BIZ0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdh20Q8BIZ0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh20Q8BIZ0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.46■□□□□ 0.87
Pcdh20Q8BIZ0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh20Q8BIZ0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh20Q8BIZ0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh20Q8BIZ0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdh20Q8BIZ0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh20Q8BIZ0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Pcdh20Q8BIZ0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.45■□□□□ 0.86
Pcdh20Q8BIZ0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdh20Q8BIZ0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh20Q8BIZ0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh20Q8BIZ0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdh20Q8BIZ0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh20Q8BIZ0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdh20Q8BIZ0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdh20Q8BIZ0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdh20Q8BIZ0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdh20Q8BIZ0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms