Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc5a7Q8BGY9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc5a7Q8BGY9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc5a7Q8BGY9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc5a7Q8BGY9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc5a7Q8BGY9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Slc5a7Q8BGY9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc5a7Q8BGY9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Gm4799-201ENSMUST00000095396 657 ntBASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Slc5a7Q8BGY9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc5a7Q8BGY9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc5a7Q8BGY9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc5a7Q8BGY9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc5a7Q8BGY9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Terc-201ENSMUST00000082862 423 ntBASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc5a7Q8BGY9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slc5a7Q8BGY9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.47■□□□□ 0.55
Slc5a7Q8BGY9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc5a7Q8BGY9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.46■□□□□ 0.54
Slc5a7Q8BGY9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc5a7Q8BGY9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Slc5a7Q8BGY9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Slc5a7Q8BGY9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc5a7Q8BGY9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Slc5a7Q8BGY9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc5a7Q8BGY9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc5a7Q8BGY9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc5a7Q8BGY9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms