Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim23Q8BGX0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim23Q8BGX0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim23Q8BGX0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim23Q8BGX0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim23Q8BGX0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.49■□□□□ 0.87
Trim23Q8BGX0 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.49■□□□□ 0.87
Trim23Q8BGX0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.49■□□□□ 0.87
Trim23Q8BGX0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim23Q8BGX0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim23Q8BGX0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim23Q8BGX0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim23Q8BGX0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim23Q8BGX0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim23Q8BGX0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim23Q8BGX0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim23Q8BGX0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim23Q8BGX0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim23Q8BGX0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim23Q8BGX0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim23Q8BGX0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trim23Q8BGX0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim23Q8BGX0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.44■□□□□ 0.86
Trim23Q8BGX0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim23Q8BGX0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trim23Q8BGX0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.43■□□□□ 0.86
Trim23Q8BGX0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim23Q8BGX0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim23Q8BGX0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.42■□□□□ 0.86
Trim23Q8BGX0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim23Q8BGX0 Gm9959-201ENSMUST00000068277 390 ntBASIC20.42■□□□□ 0.86
Trim23Q8BGX0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim23Q8BGX0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim23Q8BGX0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Gm10399-202ENSMUST00000202768 748 ntBASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Trim23Q8BGX0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim23Q8BGX0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim23Q8BGX0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim23Q8BGX0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim23Q8BGX0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim23Q8BGX0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.4■□□□□ 0.86
Trim23Q8BGX0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim23Q8BGX0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim23Q8BGX0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim23Q8BGX0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim23Q8BGX0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim23Q8BGX0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim23Q8BGX0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Trim23Q8BGX0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim23Q8BGX0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim23Q8BGX0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim23Q8BGX0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim23Q8BGX0 Rps24-207ENSMUST00000224568 714 ntBASIC20.38■□□□□ 0.85
Trim23Q8BGX0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim23Q8BGX0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.38■□□□□ 0.85
Trim23Q8BGX0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms