Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atpaf1Q811I0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atpaf1Q811I0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Atpaf1Q811I0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atpaf1Q811I0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atpaf1Q811I0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Gm45855-201ENSMUST00000212546 880 ntBASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atpaf1Q811I0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Atpaf1Q811I0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atpaf1Q811I0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.23■□□□□ 0.35
Atpaf1Q811I0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atpaf1Q811I0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atpaf1Q811I0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.21■□□□□ 0.35
Atpaf1Q811I0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atpaf1Q811I0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Atpaf1Q811I0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atpaf1Q811I0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atpaf1Q811I0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atpaf1Q811I0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atpaf1Q811I0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.19■□□□□ 0.34
Atpaf1Q811I0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.19■□□□□ 0.34
Atpaf1Q811I0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.18■□□□□ 0.34
Atpaf1Q811I0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Atpaf1Q811I0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atpaf1Q811I0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Atpaf1Q811I0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Atpaf1Q811I0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.17■□□□□ 0.34
Atpaf1Q811I0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atpaf1Q811I0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atpaf1Q811I0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atpaf1Q811I0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atpaf1Q811I0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atpaf1Q811I0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.15■□□□□ 0.34
Atpaf1Q811I0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Atpaf1Q811I0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atpaf1Q811I0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Atpaf1Q811I0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.14■□□□□ 0.34
Atpaf1Q811I0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms