Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.55■■□□□ 1.52
Ddx55Q6ZPL9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx55Q6ZPL9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx55Q6ZPL9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.55■■□□□ 1.52
Ddx55Q6ZPL9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx55Q6ZPL9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx55Q6ZPL9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx55Q6ZPL9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx55Q6ZPL9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx55Q6ZPL9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.53■■□□□ 1.52
Ddx55Q6ZPL9 Gm18284-201ENSMUST00000172604 624 ntBASIC24.53■■□□□ 1.52
Ddx55Q6ZPL9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx55Q6ZPL9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx55Q6ZPL9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.53■■□□□ 1.52
Ddx55Q6ZPL9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx55Q6ZPL9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Ddx55Q6ZPL9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC24.52■■□□□ 1.52
Ddx55Q6ZPL9 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.52■■□□□ 1.52
Ddx55Q6ZPL9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Ddx55Q6ZPL9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx55Q6ZPL9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx55Q6ZPL9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx55Q6ZPL9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Ddx55Q6ZPL9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Ddx55Q6ZPL9 Gm6139-201ENSMUST00000079261 882 ntBASIC24.51■■□□□ 1.51
Ddx55Q6ZPL9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Ddx55Q6ZPL9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx55Q6ZPL9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx55Q6ZPL9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx55Q6ZPL9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Ddx55Q6ZPL9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 Gm9870-201ENSMUST00000063874 645 ntBASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.49■■□□□ 1.51
Ddx55Q6ZPL9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC24.48■■□□□ 1.51
Ddx55Q6ZPL9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.48■■□□□ 1.51
Ddx55Q6ZPL9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Ddx55Q6ZPL9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx55Q6ZPL9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.48■■□□□ 1.51
Ddx55Q6ZPL9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx55Q6ZPL9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx55Q6ZPL9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx55Q6ZPL9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx55Q6ZPL9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx55Q6ZPL9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx55Q6ZPL9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx55Q6ZPL9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.46■■□□□ 1.51
Ddx55Q6ZPL9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Ddx55Q6ZPL9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
Ddx55Q6ZPL9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx55Q6ZPL9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx55Q6ZPL9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ddx55Q6ZPL9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ddx55Q6ZPL9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Ddx55Q6ZPL9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.45■■□□□ 1.5
Ddx55Q6ZPL9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.45■■□□□ 1.5
Ddx55Q6ZPL9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
Ddx55Q6ZPL9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx55Q6ZPL9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx55Q6ZPL9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx55Q6ZPL9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx55Q6ZPL9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx55Q6ZPL9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx55Q6ZPL9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx55Q6ZPL9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx55Q6ZPL9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx55Q6ZPL9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx55Q6ZPL9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.43■■□□□ 1.5
Ddx55Q6ZPL9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.42■■□□□ 1.5
Ddx55Q6ZPL9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx55Q6ZPL9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
Ddx55Q6ZPL9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Ddx55Q6ZPL9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx55Q6ZPL9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Ddx55Q6ZPL9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx55Q6ZPL9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Ddx55Q6ZPL9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
Ddx55Q6ZPL9 Gm43137-201ENSMUST00000198052 594 ntBASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms