Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Gm40881-201ENSMUST00000223397 166 ntBASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc46a1Q6PEM8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a1Q6PEM8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.56■□□□□ 0.56
Slc46a1Q6PEM8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.56■□□□□ 0.56
Slc46a1Q6PEM8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.56■□□□□ 0.56
Slc46a1Q6PEM8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a1Q6PEM8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Slc46a1Q6PEM8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.55■□□□□ 0.56
Slc46a1Q6PEM8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Slc46a1Q6PEM8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Slc46a1Q6PEM8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Slc46a1Q6PEM8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a1Q6PEM8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a1Q6PEM8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a1Q6PEM8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Slc46a1Q6PEM8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Slc46a1Q6PEM8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.52■□□□□ 0.56
Slc46a1Q6PEM8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Slc46a1Q6PEM8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Slc46a1Q6PEM8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc46a1Q6PEM8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Gm10399-202ENSMUST00000202768 748 ntBASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Slc46a1Q6PEM8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slc46a1Q6PEM8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc46a1Q6PEM8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms