Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav7-2Q5R1I3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav7-2Q5R1I3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav7-2Q5R1I3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav7-2Q5R1I3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav7-2Q5R1I3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav7-2Q5R1I3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7-2Q5R1I3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Gm10420-201ENSMUST00000121713 882 ntBASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav7-2Q5R1I3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trav7-2Q5R1I3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-2Q5R1I3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-2Q5R1I3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-2Q5R1I3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-2Q5R1I3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-2Q5R1I3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7-2Q5R1I3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7-2Q5R1I3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-2Q5R1I3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav7-2Q5R1I3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-2Q5R1I3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav7-2Q5R1I3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7-2Q5R1I3 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.53■□□□□ 0.08
Trav7-2Q5R1I3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-2Q5R1I3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav7-2Q5R1I3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav7-2Q5R1I3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7-2Q5R1I3 Cap2-205ENSMUST00000225824 1634 ntBASIC15.52■□□□□ 0.08
Trav7-2Q5R1I3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7-2Q5R1I3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.52■□□□□ 0.07
Trav7-2Q5R1I3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav7-2Q5R1I3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms