Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7d-4Q5R1H9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7d-4Q5R1H9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7d-4Q5R1H9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.1■□□□□ 0.17
Trav7d-4Q5R1H9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-4Q5R1H9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-4Q5R1H9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav7d-4Q5R1H9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7d-4Q5R1H9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav7d-4Q5R1H9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav7d-4Q5R1H9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav7d-4Q5R1H9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7d-4Q5R1H9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7d-4Q5R1H9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7d-4Q5R1H9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trav7d-4Q5R1H9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7d-4Q5R1H9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7d-4Q5R1H9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7d-4Q5R1H9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7d-4Q5R1H9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav7d-4Q5R1H9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7d-4Q5R1H9 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.05■□□□□ 0.16
Trav7d-4Q5R1H9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav7d-4Q5R1H9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7d-4Q5R1H9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7d-4Q5R1H9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7d-4Q5R1H9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7d-4Q5R1H9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7d-4Q5R1H9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trav7d-4Q5R1H9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trav7d-4Q5R1H9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7d-4Q5R1H9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7d-4Q5R1H9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 Golph3-202ENSMUST00000226517 2359 ntBASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav7d-4Q5R1H9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms