Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav8d-1Q5R1H8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8d-1Q5R1H8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8d-1Q5R1H8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8d-1Q5R1H8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav8d-1Q5R1H8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav8d-1Q5R1H8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8d-1Q5R1H8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav8d-1Q5R1H8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8d-1Q5R1H8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav8d-1Q5R1H8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8d-1Q5R1H8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav8d-1Q5R1H8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8d-1Q5R1H8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav8d-1Q5R1H8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.17■□□□□ 0.34
Trav8d-1Q5R1H8 Terc-201ENSMUST00000082862 423 ntBASIC17.17■□□□□ 0.34
Trav8d-1Q5R1H8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8d-1Q5R1H8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav8d-1Q5R1H8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Gm16437-201ENSMUST00000025669 507 ntBASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav8d-1Q5R1H8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav8d-1Q5R1H8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav8d-1Q5R1H8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trav8d-1Q5R1H8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav8d-1Q5R1H8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav8d-1Q5R1H8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav8d-1Q5R1H8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Gm11175-201ENSMUST00000116172 543 ntBASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav8d-1Q5R1H8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav8d-1Q5R1H8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-1Q5R1H8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-1Q5R1H8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-1Q5R1H8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-1Q5R1H8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav8d-1Q5R1H8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-1Q5R1H8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav8d-1Q5R1H8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav8d-1Q5R1H8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms