Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.5■□□□□ 0.71
Urb1Q571H0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Urb1Q571H0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Urb1Q571H0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Urb1Q571H0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Urb1Q571H0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Urb1Q571H0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Urb1Q571H0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Urb1Q571H0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
Urb1Q571H0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Urb1Q571H0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Urb1Q571H0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Urb1Q571H0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Urb1Q571H0 Gm8495-201ENSMUST00000188740 694 ntBASIC19.49■□□□□ 0.71
Urb1Q571H0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Urb1Q571H0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Urb1Q571H0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Urb1Q571H0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Urb1Q571H0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Urb1Q571H0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.48■□□□□ 0.71
Urb1Q571H0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.48■□□□□ 0.71
Urb1Q571H0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Urb1Q571H0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Urb1Q571H0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Urb1Q571H0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Urb1Q571H0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Urb1Q571H0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Urb1Q571H0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Urb1Q571H0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Urb1Q571H0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Urb1Q571H0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Urb1Q571H0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Urb1Q571H0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Urb1Q571H0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Urb1Q571H0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
Urb1Q571H0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Urb1Q571H0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Urb1Q571H0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Urb1Q571H0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Urb1Q571H0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Urb1Q571H0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Urb1Q571H0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.45■□□□□ 0.7
Urb1Q571H0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.45■□□□□ 0.7
Urb1Q571H0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Urb1Q571H0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Urb1Q571H0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Urb1Q571H0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Urb1Q571H0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Urb1Q571H0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.44■□□□□ 0.7
Urb1Q571H0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Urb1Q571H0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Urb1Q571H0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Urb1Q571H0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Urb1Q571H0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Urb1Q571H0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Urb1Q571H0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Urb1Q571H0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Urb1Q571H0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Urb1Q571H0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Urb1Q571H0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Urb1Q571H0 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.43■□□□□ 0.7
Urb1Q571H0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Urb1Q571H0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Urb1Q571H0 Gm43137-201ENSMUST00000198052 594 ntBASIC19.42■□□□□ 0.7
Urb1Q571H0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
Urb1Q571H0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Urb1Q571H0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Urb1Q571H0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
Urb1Q571H0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Urb1Q571H0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Urb1Q571H0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Urb1Q571H0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Urb1Q571H0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Urb1Q571H0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Urb1Q571H0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Urb1Q571H0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Urb1Q571H0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Urb1Q571H0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Urb1Q571H0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Urb1Q571H0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Urb1Q571H0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Urb1Q571H0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Urb1Q571H0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.39■□□□□ 0.69
Urb1Q571H0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.39■□□□□ 0.69
Urb1Q571H0 Gm26571-201ENSMUST00000181399 666 ntBASIC19.39■□□□□ 0.69
Urb1Q571H0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Urb1Q571H0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Urb1Q571H0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Urb1Q571H0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Urb1Q571H0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.38■□□□□ 0.69
Urb1Q571H0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Urb1Q571H0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms