Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC31.94■■■□□ 2.7
Arhgef40Q3UPH7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Arhgef40Q3UPH7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC31.94■■■□□ 2.7
Arhgef40Q3UPH7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Arhgef40Q3UPH7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC31.93■■■□□ 2.7
Arhgef40Q3UPH7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Arhgef40Q3UPH7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Arhgef40Q3UPH7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC31.93■■■□□ 2.7
Arhgef40Q3UPH7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Arhgef40Q3UPH7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Arhgef40Q3UPH7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Arhgef40Q3UPH7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC31.91■■■□□ 2.7
Arhgef40Q3UPH7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC31.91■■■□□ 2.7
Arhgef40Q3UPH7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Arhgef40Q3UPH7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Arhgef40Q3UPH7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
Arhgef40Q3UPH7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Arhgef40Q3UPH7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC31.9■■■□□ 2.7
Arhgef40Q3UPH7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Arhgef40Q3UPH7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Arhgef40Q3UPH7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Arhgef40Q3UPH7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC31.89■■■□□ 2.7
Arhgef40Q3UPH7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Arhgef40Q3UPH7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Arhgef40Q3UPH7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Arhgef40Q3UPH7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Arhgef40Q3UPH7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Arhgef40Q3UPH7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Arhgef40Q3UPH7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Arhgef40Q3UPH7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Arhgef40Q3UPH7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Arhgef40Q3UPH7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Arhgef40Q3UPH7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Arhgef40Q3UPH7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
Arhgef40Q3UPH7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Arhgef40Q3UPH7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Arhgef40Q3UPH7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Arhgef40Q3UPH7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC31.83■■■□□ 2.69
Arhgef40Q3UPH7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Arhgef40Q3UPH7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Arhgef40Q3UPH7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC31.83■■■□□ 2.69
Arhgef40Q3UPH7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Arhgef40Q3UPH7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Arhgef40Q3UPH7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC31.82■■■□□ 2.68
Arhgef40Q3UPH7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Arhgef40Q3UPH7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
Arhgef40Q3UPH7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Arhgef40Q3UPH7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Arhgef40Q3UPH7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Arhgef40Q3UPH7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC31.81■■■□□ 2.68
Arhgef40Q3UPH7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
Arhgef40Q3UPH7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Arhgef40Q3UPH7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Arhgef40Q3UPH7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC31.8■■■□□ 2.68
Arhgef40Q3UPH7 Gm8495-201ENSMUST00000188740 694 ntBASIC31.8■■■□□ 2.68
Arhgef40Q3UPH7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Arhgef40Q3UPH7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
Arhgef40Q3UPH7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Arhgef40Q3UPH7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Arhgef40Q3UPH7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Arhgef40Q3UPH7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Arhgef40Q3UPH7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Arhgef40Q3UPH7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Arhgef40Q3UPH7 Gm18284-201ENSMUST00000172604 624 ntBASIC31.78■■■□□ 2.68
Arhgef40Q3UPH7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Arhgef40Q3UPH7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Arhgef40Q3UPH7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC31.77■■■□□ 2.68
Arhgef40Q3UPH7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Arhgef40Q3UPH7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Arhgef40Q3UPH7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Arhgef40Q3UPH7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Arhgef40Q3UPH7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC31.76■■■□□ 2.68
Arhgef40Q3UPH7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC31.76■■■□□ 2.68
Arhgef40Q3UPH7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
Arhgef40Q3UPH7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Arhgef40Q3UPH7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Arhgef40Q3UPH7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
Arhgef40Q3UPH7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Arhgef40Q3UPH7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Arhgef40Q3UPH7 AC116713.1-201ENSMUST00000215074 430 ntBASIC31.75■■■□□ 2.67
Arhgef40Q3UPH7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Arhgef40Q3UPH7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC31.74■■■□□ 2.67
Arhgef40Q3UPH7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
Arhgef40Q3UPH7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC31.73■■■□□ 2.67
Arhgef40Q3UPH7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Arhgef40Q3UPH7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Arhgef40Q3UPH7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Arhgef40Q3UPH7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
Arhgef40Q3UPH7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Arhgef40Q3UPH7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC31.71■■■□□ 2.67
Arhgef40Q3UPH7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC31.71■■■□□ 2.67
Arhgef40Q3UPH7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC31.71■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms