Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.3■□□□□ 0.84
Smu1Q3UKJ7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smu1Q3UKJ7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smu1Q3UKJ7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smu1Q3UKJ7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smu1Q3UKJ7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smu1Q3UKJ7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smu1Q3UKJ7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smu1Q3UKJ7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smu1Q3UKJ7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smu1Q3UKJ7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smu1Q3UKJ7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smu1Q3UKJ7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smu1Q3UKJ7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smu1Q3UKJ7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.28■□□□□ 0.84
Smu1Q3UKJ7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Smu1Q3UKJ7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.27■□□□□ 0.83
Smu1Q3UKJ7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smu1Q3UKJ7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smu1Q3UKJ7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smu1Q3UKJ7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Smu1Q3UKJ7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smu1Q3UKJ7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Smu1Q3UKJ7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Smu1Q3UKJ7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smu1Q3UKJ7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.24■□□□□ 0.83
Smu1Q3UKJ7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smu1Q3UKJ7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smu1Q3UKJ7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Smu1Q3UKJ7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smu1Q3UKJ7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smu1Q3UKJ7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smu1Q3UKJ7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.21■□□□□ 0.83
Smu1Q3UKJ7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smu1Q3UKJ7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smu1Q3UKJ7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.19■□□□□ 0.82
Smu1Q3UKJ7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.18■□□□□ 0.82
Smu1Q3UKJ7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smu1Q3UKJ7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.17■□□□□ 0.82
Smu1Q3UKJ7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.17■□□□□ 0.82
Smu1Q3UKJ7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.17■□□□□ 0.82
Smu1Q3UKJ7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.17■□□□□ 0.82
Smu1Q3UKJ7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smu1Q3UKJ7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smu1Q3UKJ7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Smu1Q3UKJ7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms