Protein–RNA interactions for Protein: Q3UH99

Shisa6, Protein shisa-6 homolog, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa6Q3UH99 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa6Q3UH99 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Gm12922-201ENSMUST00000120626 809 ntBASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa6Q3UH99 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Shisa6Q3UH99 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa6Q3UH99 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.33■□□□□ 0.68
Shisa6Q3UH99 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.33■□□□□ 0.68
Shisa6Q3UH99 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa6Q3UH99 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa6Q3UH99 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa6Q3UH99 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Shisa6Q3UH99 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa6Q3UH99 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shisa6Q3UH99 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa6Q3UH99 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.31■□□□□ 0.68
Shisa6Q3UH99 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa6Q3UH99 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa6Q3UH99 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Shisa6Q3UH99 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.31■□□□□ 0.68
Shisa6Q3UH99 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.31■□□□□ 0.68
Shisa6Q3UH99 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa6Q3UH99 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa6Q3UH99 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shisa6Q3UH99 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shisa6Q3UH99 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa6Q3UH99 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa6Q3UH99 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa6Q3UH99 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa6Q3UH99 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa6Q3UH99 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa6Q3UH99 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shisa6Q3UH99 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.27■□□□□ 0.68
Shisa6Q3UH99 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa6Q3UH99 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Shisa6Q3UH99 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa6Q3UH99 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa6Q3UH99 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shisa6Q3UH99 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Shisa6Q3UH99 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa6Q3UH99 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Shisa6Q3UH99 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.26■□□□□ 0.67
Shisa6Q3UH99 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shisa6Q3UH99 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa6Q3UH99 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa6Q3UH99 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.25■□□□□ 0.67
Shisa6Q3UH99 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa6Q3UH99 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shisa6Q3UH99 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.25■□□□□ 0.67
Shisa6Q3UH99 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.25■□□□□ 0.67
Shisa6Q3UH99 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa6Q3UH99 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa6Q3UH99 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.24■□□□□ 0.67
Shisa6Q3UH99 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.24■□□□□ 0.67
Shisa6Q3UH99 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shisa6Q3UH99 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shisa6Q3UH99 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Shisa6Q3UH99 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.23■□□□□ 0.67
Shisa6Q3UH99 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa6Q3UH99 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa6Q3UH99 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shisa6Q3UH99 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Shisa6Q3UH99 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.22■□□□□ 0.67
Shisa6Q3UH99 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shisa6Q3UH99 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shisa6Q3UH99 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms