Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Sox4Q06831 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox4Q06831 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.84■□□□□ 0.93
Sox4Q06831 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Sox4Q06831 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Sox4Q06831 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox4Q06831 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox4Q06831 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.83■□□□□ 0.93
Sox4Q06831 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox4Q06831 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.83■□□□□ 0.93
Sox4Q06831 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.83■□□□□ 0.92
Sox4Q06831 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox4Q06831 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox4Q06831 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sox4Q06831 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sox4Q06831 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sox4Q06831 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.82■□□□□ 0.92
Sox4Q06831 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.82■□□□□ 0.92
Sox4Q06831 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox4Q06831 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox4Q06831 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox4Q06831 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox4Q06831 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox4Q06831 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.81■□□□□ 0.92
Sox4Q06831 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox4Q06831 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox4Q06831 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.81■□□□□ 0.92
Sox4Q06831 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.81■□□□□ 0.92
Sox4Q06831 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Sox4Q06831 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox4Q06831 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox4Q06831 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox4Q06831 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Sox4Q06831 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Sox4Q06831 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox4Q06831 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.79■□□□□ 0.92
Sox4Q06831 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox4Q06831 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.79■□□□□ 0.92
Sox4Q06831 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.79■□□□□ 0.92
Sox4Q06831 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.79■□□□□ 0.92
Sox4Q06831 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.79■□□□□ 0.92
Sox4Q06831 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox4Q06831 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox4Q06831 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox4Q06831 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox4Q06831 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox4Q06831 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox4Q06831 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.78■□□□□ 0.92
Sox4Q06831 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox4Q06831 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox4Q06831 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox4Q06831 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox4Q06831 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sox4Q06831 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.77■□□□□ 0.92
Sox4Q06831 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox4Q06831 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox4Q06831 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.77■□□□□ 0.92
Sox4Q06831 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox4Q06831 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.77■□□□□ 0.92
Sox4Q06831 Gm9959-201ENSMUST00000068277 390 ntBASIC20.77■□□□□ 0.92
Sox4Q06831 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox4Q06831 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sox4Q06831 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sox4Q06831 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox4Q06831 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox4Q06831 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox4Q06831 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sox4Q06831 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Sox4Q06831 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Sox4Q06831 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Sox4Q06831 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.75■□□□□ 0.91
Sox4Q06831 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.75■□□□□ 0.91
Sox4Q06831 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sox4Q06831 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox4Q06831 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sox4Q06831 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.75■□□□□ 0.91
Sox4Q06831 Rps24-207ENSMUST00000224568 714 ntBASIC20.75■□□□□ 0.91
Sox4Q06831 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sox4Q06831 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox4Q06831 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Sox4Q06831 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Sox4Q06831 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.74■□□□□ 0.91
Sox4Q06831 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox4Q06831 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Sox4Q06831 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox4Q06831 Gm14117-201ENSMUST00000122417 843 ntBASIC20.73■□□□□ 0.91
Sox4Q06831 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox4Q06831 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox4Q06831 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox4Q06831 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox4Q06831 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 147.3 ms