Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx6P54823 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx6P54823 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx6P54823 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.7■■□□□ 1.06
Ddx6P54823 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.7■■□□□ 1.06
Ddx6P54823 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx6P54823 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx6P54823 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx6P54823 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ddx6P54823 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Ddx6P54823 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx6P54823 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx6P54823 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.69■■□□□ 1.06
Ddx6P54823 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.69■■□□□ 1.06
Ddx6P54823 Golgb1-201ENSMUST00000023534 498 ntBASIC21.69■■□□□ 1.06
Ddx6P54823 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx6P54823 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx6P54823 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx6P54823 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx6P54823 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx6P54823 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.68■■□□□ 1.06
Ddx6P54823 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.68■■□□□ 1.06
Ddx6P54823 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx6P54823 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ddx6P54823 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx6P54823 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx6P54823 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Ddx6P54823 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.67■■□□□ 1.06
Ddx6P54823 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx6P54823 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx6P54823 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx6P54823 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.67■■□□□ 1.06
Ddx6P54823 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.67■■□□□ 1.06
Ddx6P54823 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Ddx6P54823 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.66■■□□□ 1.06
Ddx6P54823 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.66■■□□□ 1.06
Ddx6P54823 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.66■■□□□ 1.06
Ddx6P54823 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx6P54823 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Ddx6P54823 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.65■■□□□ 1.06
Ddx6P54823 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx6P54823 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx6P54823 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx6P54823 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx6P54823 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx6P54823 Gm12821-201ENSMUST00000120022 600 ntBASIC21.65■■□□□ 1.06
Ddx6P54823 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx6P54823 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx6P54823 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx6P54823 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx6P54823 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.64■■□□□ 1.05
Ddx6P54823 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.64■■□□□ 1.05
Ddx6P54823 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.64■■□□□ 1.05
Ddx6P54823 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx6P54823 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx6P54823 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx6P54823 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx6P54823 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx6P54823 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ddx6P54823 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.63■■□□□ 1.05
Ddx6P54823 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx6P54823 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ddx6P54823 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx6P54823 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx6P54823 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx6P54823 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ddx6P54823 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx6P54823 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx6P54823 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ddx6P54823 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx6P54823 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx6P54823 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx6P54823 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx6P54823 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx6P54823 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Ddx6P54823 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Ddx6P54823 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx6P54823 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx6P54823 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.59■■□□□ 1.05
Ddx6P54823 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.59■■□□□ 1.05
Ddx6P54823 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx6P54823 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ddx6P54823 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx6P54823 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx6P54823 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx6P54823 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Ddx6P54823 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx6P54823 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx6P54823 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx6P54823 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx6P54823 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.57■■□□□ 1.04
Ddx6P54823 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx6P54823 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.57■■□□□ 1.04
Ddx6P54823 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ddx6P54823 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx6P54823 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx6P54823 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx6P54823 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx6P54823 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx6P54823 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms