Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rfx3P48381 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Rfx3P48381 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rfx3P48381 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rfx3P48381 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Rfx3P48381 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.01■□□□□ 0.63
Rfx3P48381 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Rfx3P48381 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rfx3P48381 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx3P48381 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx3P48381 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx3P48381 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19■□□□□ 0.63
Rfx3P48381 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19■□□□□ 0.63
Rfx3P48381 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rfx3P48381 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx3P48381 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rfx3P48381 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rfx3P48381 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx3P48381 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rfx3P48381 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rfx3P48381 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rfx3P48381 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Rfx3P48381 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rfx3P48381 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rfx3P48381 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx3P48381 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rfx3P48381 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx3P48381 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rfx3P48381 Gm7332-201ENSMUST00000118351 454 ntBASIC18.97■□□□□ 0.63
Rfx3P48381 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.97■□□□□ 0.63
Rfx3P48381 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.97■□□□□ 0.63
Rfx3P48381 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx3P48381 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx3P48381 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rfx3P48381 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rfx3P48381 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rfx3P48381 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rfx3P48381 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx3P48381 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx3P48381 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rfx3P48381 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx3P48381 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rfx3P48381 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rfx3P48381 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.95■□□□□ 0.62
Rfx3P48381 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx3P48381 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.94■□□□□ 0.62
Rfx3P48381 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rfx3P48381 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.94■□□□□ 0.62
Rfx3P48381 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx3P48381 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx3P48381 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx3P48381 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx3P48381 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rfx3P48381 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rfx3P48381 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.93■□□□□ 0.62
Rfx3P48381 Gm12366-201ENSMUST00000121722 873 ntBASIC18.93■□□□□ 0.62
Rfx3P48381 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.93■□□□□ 0.62
Rfx3P48381 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.93■□□□□ 0.62
Rfx3P48381 Gm5786-201ENSMUST00000085368 882 ntBASIC18.93■□□□□ 0.62
Rfx3P48381 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rfx3P48381 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms