Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Nedd8P29595 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nedd8P29595 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd8P29595 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nedd8P29595 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd8P29595 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.55■□□□□ 0.72
Nedd8P29595 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd8P29595 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nedd8P29595 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nedd8P29595 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.54■□□□□ 0.72
Nedd8P29595 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nedd8P29595 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nedd8P29595 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd8P29595 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd8P29595 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd8P29595 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.53■□□□□ 0.72
Nedd8P29595 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd8P29595 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd8P29595 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nedd8P29595 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nedd8P29595 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nedd8P29595 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nedd8P29595 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.52■□□□□ 0.72
Nedd8P29595 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nedd8P29595 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nedd8P29595 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nedd8P29595 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nedd8P29595 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nedd8P29595 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.51■□□□□ 0.71
Nedd8P29595 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nedd8P29595 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nedd8P29595 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nedd8P29595 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nedd8P29595 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Nedd8P29595 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nedd8P29595 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.49■□□□□ 0.71
Nedd8P29595 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nedd8P29595 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nedd8P29595 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nedd8P29595 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nedd8P29595 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nedd8P29595 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nedd8P29595 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nedd8P29595 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nedd8P29595 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.48■□□□□ 0.71
Nedd8P29595 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nedd8P29595 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.48■□□□□ 0.71
Nedd8P29595 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nedd8P29595 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nedd8P29595 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nedd8P29595 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.47■□□□□ 0.71
Nedd8P29595 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd8P29595 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Nedd8P29595 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd8P29595 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd8P29595 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd8P29595 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd8P29595 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd8P29595 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nedd8P29595 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd8P29595 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd8P29595 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd8P29595 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd8P29595 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd8P29595 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Nedd8P29595 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nedd8P29595 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nedd8P29595 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd8P29595 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Nedd8P29595 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd8P29595 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd8P29595 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd8P29595 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd8P29595 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nedd8P29595 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd8P29595 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nedd8P29595 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nedd8P29595 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.44■□□□□ 0.7
Nedd8P29595 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Nedd8P29595 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nedd8P29595 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nedd8P29595 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.43■□□□□ 0.7
Nedd8P29595 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nedd8P29595 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nedd8P29595 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nedd8P29595 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nedd8P29595 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nedd8P29595 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nedd8P29595 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nedd8P29595 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Nedd8P29595 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms