Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cntn1P12960 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cntn1P12960 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cntn1P12960 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cntn1P12960 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cntn1P12960 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cntn1P12960 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Cntn1P12960 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cntn1P12960 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cntn1P12960 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntn1P12960 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Cntn1P12960 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.32■□□□□ 0.84
Cntn1P12960 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntn1P12960 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntn1P12960 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cntn1P12960 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntn1P12960 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.31■□□□□ 0.84
Cntn1P12960 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.31■□□□□ 0.84
Cntn1P12960 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntn1P12960 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntn1P12960 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cntn1P12960 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cntn1P12960 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cntn1P12960 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntn1P12960 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cntn1P12960 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cntn1P12960 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.29■□□□□ 0.84
Cntn1P12960 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cntn1P12960 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cntn1P12960 Gm7417-201ENSMUST00000192950 473 ntBASIC20.29■□□□□ 0.84
Cntn1P12960 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cntn1P12960 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cntn1P12960 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.28■□□□□ 0.84
Cntn1P12960 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.28■□□□□ 0.84
Cntn1P12960 Gm40881-201ENSMUST00000223397 166 ntBASIC20.28■□□□□ 0.84
Cntn1P12960 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntn1P12960 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntn1P12960 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntn1P12960 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntn1P12960 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cntn1P12960 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cntn1P12960 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.27■□□□□ 0.84
Cntn1P12960 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.27■□□□□ 0.84
Cntn1P12960 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.27■□□□□ 0.84
Cntn1P12960 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cntn1P12960 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cntn1P12960 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.27■□□□□ 0.83
Cntn1P12960 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cntn1P12960 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cntn1P12960 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntn1P12960 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntn1P12960 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntn1P12960 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cntn1P12960 Gm10399-202ENSMUST00000202768 748 ntBASIC20.26■□□□□ 0.83
Cntn1P12960 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntn1P12960 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cntn1P12960 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cntn1P12960 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntn1P12960 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.25■□□□□ 0.83
Cntn1P12960 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cntn1P12960 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntn1P12960 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cntn1P12960 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cntn1P12960 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.24■□□□□ 0.83
Cntn1P12960 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cntn1P12960 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cntn1P12960 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntn1P12960 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntn1P12960 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cntn1P12960 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.24■□□□□ 0.83
Cntn1P12960 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cntn1P12960 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Cntn1P12960 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntn1P12960 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cntn1P12960 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntn1P12960 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntn1P12960 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cntn1P12960 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cntn1P12960 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Cntn1P12960 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.22■□□□□ 0.83
Cntn1P12960 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.22■□□□□ 0.83
Cntn1P12960 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.22■□□□□ 0.83
Cntn1P12960 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.22■□□□□ 0.83
Cntn1P12960 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cntn1P12960 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cntn1P12960 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntn1P12960 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cntn1P12960 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.21■□□□□ 0.83
Cntn1P12960 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.21■□□□□ 0.83
Cntn1P12960 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntn1P12960 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.21■□□□□ 0.83
Cntn1P12960 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cntn1P12960 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms