Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.91■□□□□ 0.62
P06344 Rps24-207ENSMUST00000224568 714 ntBASIC18.91■□□□□ 0.62
P06344 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P06344 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
P06344 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.9■□□□□ 0.62
P06344 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
P06344 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P06344 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P06344 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
P06344 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
P06344 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.89■□□□□ 0.61
P06344 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P06344 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P06344 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P06344 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.88■□□□□ 0.61
P06344 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P06344 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P06344 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P06344 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P06344 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P06344 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P06344 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P06344 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
P06344 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.87■□□□□ 0.61
P06344 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Gm9959-201ENSMUST00000068277 390 ntBASIC18.87■□□□□ 0.61
P06344 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
P06344 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P06344 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.86■□□□□ 0.61
P06344 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.86■□□□□ 0.61
P06344 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.86■□□□□ 0.61
P06344 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.86■□□□□ 0.61
P06344 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P06344 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.85■□□□□ 0.61
P06344 Gm45102-201ENSMUST00000207427 857 ntBASIC18.85■□□□□ 0.61
P06344 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
P06344 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P06344 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.84■□□□□ 0.61
P06344 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.84■□□□□ 0.61
P06344 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
P06344 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.84■□□□□ 0.61
P06344 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P06344 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
P06344 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P06344 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P06344 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P06344 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.83■□□□□ 0.61
P06344 Gm14117-201ENSMUST00000122417 843 ntBASIC18.83■□□□□ 0.6
P06344 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.83■□□□□ 0.6
P06344 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P06344 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P06344 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P06344 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.82■□□□□ 0.6
P06344 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P06344 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.82■□□□□ 0.6
P06344 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P06344 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P06344 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P06344 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.81■□□□□ 0.6
P06344 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.81■□□□□ 0.6
P06344 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
P06344 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P06344 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
P06344 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
P06344 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
P06344 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.8■□□□□ 0.6
P06344 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.8■□□□□ 0.6
P06344 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
P06344 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P06344 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P06344 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
P06344 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms