Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufa1O35683 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufa1O35683 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufa1O35683 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ndufa1O35683 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufa1O35683 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufa1O35683 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufa1O35683 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufa1O35683 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufa1O35683 Gm22567-201ENSMUST00000175542 342 ntBASIC15.1■□□□□ 0.01
Ndufa1O35683 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.1■□□□□ 0.01
Ndufa1O35683 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ndufa1O35683 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa1O35683 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa1O35683 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ndufa1O35683 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.09■□□□□ 0.01
Ndufa1O35683 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.09■□□□□ 0.01
Ndufa1O35683 Gm4799-201ENSMUST00000095396 657 ntBASIC15.09■□□□□ 0.01
Ndufa1O35683 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa1O35683 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa1O35683 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa1O35683 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ndufa1O35683 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.08■□□□□ 0.01
Ndufa1O35683 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ndufa1O35683 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Ndufa1O35683 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ndufa1O35683 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ndufa1O35683 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa1O35683 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa1O35683 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa1O35683 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ndufa1O35683 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC15.07■□□□□ 0
Ndufa1O35683 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.07■□□□□ 0
Ndufa1O35683 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa1O35683 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa1O35683 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ndufa1O35683 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ndufa1O35683 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.06■□□□□ 0
Ndufa1O35683 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ndufa1O35683 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ndufa1O35683 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ndufa1O35683 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa1O35683 Gm11599-201ENSMUST00000118720 878 ntBASIC15.05■□□□□ -0
Ndufa1O35683 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ndufa1O35683 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndufa1O35683 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ndufa1O35683 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ndufa1O35683 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Ndufa1O35683 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ndufa1O35683 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndufa1O35683 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ndufa1O35683 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ndufa1O35683 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.03■□□□□ -0
Ndufa1O35683 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.03■□□□□ -0
Ndufa1O35683 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndufa1O35683 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ndufa1O35683 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndufa1O35683 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ndufa1O35683 Golph3-202ENSMUST00000226517 2359 ntBASIC15.02■□□□□ -0
Ndufa1O35683 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.02□□□□□ -0.01
Ndufa1O35683 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ndufa1O35683 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ndufa1O35683 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndufa1O35683 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndufa1O35683 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ndufa1O35683 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ndufa1O35683 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndufa1O35683 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ndufa1O35683 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ndufa1O35683 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms