Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clk3O35492 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Gm10420-201ENSMUST00000121713 882 ntBASIC20■□□□□ 0.79
Clk3O35492 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clk3O35492 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clk3O35492 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk3O35492 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk3O35492 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Clk3O35492 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clk3O35492 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Clk3O35492 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clk3O35492 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Clk3O35492 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.99■□□□□ 0.79
Clk3O35492 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Clk3O35492 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk3O35492 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk3O35492 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk3O35492 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk3O35492 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Clk3O35492 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clk3O35492 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk3O35492 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clk3O35492 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.97■□□□□ 0.79
Clk3O35492 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk3O35492 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clk3O35492 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk3O35492 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clk3O35492 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Clk3O35492 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Clk3O35492 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.96■□□□□ 0.79
Clk3O35492 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.96■□□□□ 0.79
Clk3O35492 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.96■□□□□ 0.79
Clk3O35492 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clk3O35492 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Clk3O35492 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Clk3O35492 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Clk3O35492 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk3O35492 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk3O35492 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk3O35492 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Clk3O35492 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk3O35492 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clk3O35492 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clk3O35492 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clk3O35492 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clk3O35492 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.94■□□□□ 0.78
Clk3O35492 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Clk3O35492 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clk3O35492 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clk3O35492 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clk3O35492 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clk3O35492 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clk3O35492 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.93■□□□□ 0.78
Clk3O35492 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Clk3O35492 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clk3O35492 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Clk3O35492 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Clk3O35492 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk3O35492 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk3O35492 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk3O35492 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk3O35492 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk3O35492 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clk3O35492 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Clk3O35492 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.91■□□□□ 0.78
Clk3O35492 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk3O35492 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk3O35492 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.91■□□□□ 0.78
Clk3O35492 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk3O35492 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clk3O35492 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clk3O35492 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Clk3O35492 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk3O35492 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Clk3O35492 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk3O35492 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clk3O35492 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clk3O35492 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk3O35492 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clk3O35492 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk3O35492 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clk3O35492 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Clk3O35492 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk3O35492 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk3O35492 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms