Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC27.77■■■□□ 2.04
Col15a1O35206 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC27.76■■■□□ 2.03
Col15a1O35206 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col15a1O35206 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Col15a1O35206 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC27.75■■■□□ 2.03
Col15a1O35206 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col15a1O35206 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Col15a1O35206 AC158990.1-201ENSMUST00000221450 2016 ntBASIC27.74■■■□□ 2.03
Col15a1O35206 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Col15a1O35206 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col15a1O35206 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col15a1O35206 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col15a1O35206 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col15a1O35206 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC27.73■■■□□ 2.03
Col15a1O35206 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC27.73■■■□□ 2.03
Col15a1O35206 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Col15a1O35206 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col15a1O35206 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col15a1O35206 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col15a1O35206 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Col15a1O35206 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC27.71■■■□□ 2.03
Col15a1O35206 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col15a1O35206 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col15a1O35206 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Col15a1O35206 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Col15a1O35206 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Col15a1O35206 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Col15a1O35206 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Col15a1O35206 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Col15a1O35206 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col15a1O35206 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Col15a1O35206 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col15a1O35206 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Col15a1O35206 Gm9207-201ENSMUST00000198773 1115 ntBASIC27.69■■■□□ 2.02
Col15a1O35206 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Col15a1O35206 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC27.68■■■□□ 2.02
Col15a1O35206 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC27.68■■■□□ 2.02
Col15a1O35206 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Col15a1O35206 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Col15a1O35206 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC27.67■■■□□ 2.02
Col15a1O35206 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Col15a1O35206 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Col15a1O35206 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col15a1O35206 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC27.66■■■□□ 2.02
Col15a1O35206 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Col15a1O35206 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Col15a1O35206 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Col15a1O35206 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Col15a1O35206 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Col15a1O35206 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC27.65■■■□□ 2.02
Col15a1O35206 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC27.65■■■□□ 2.02
Col15a1O35206 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Col15a1O35206 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC27.64■■■□□ 2.02
Col15a1O35206 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
Col15a1O35206 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Col15a1O35206 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
Col15a1O35206 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC27.63■■■□□ 2.01
Col15a1O35206 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Col15a1O35206 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Col15a1O35206 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col15a1O35206 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col15a1O35206 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Col15a1O35206 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Col15a1O35206 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col15a1O35206 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col15a1O35206 Gm9870-201ENSMUST00000063874 645 ntBASIC27.61■■■□□ 2.01
Col15a1O35206 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col15a1O35206 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col15a1O35206 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col15a1O35206 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Col15a1O35206 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Col15a1O35206 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC27.6■■■□□ 2.01
Col15a1O35206 AC116713.1-201ENSMUST00000215074 430 ntBASIC27.6■■■□□ 2.01
Col15a1O35206 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Col15a1O35206 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Col15a1O35206 Gm2011-201ENSMUST00000203124 1263 ntBASIC27.6■■■□□ 2.01
Col15a1O35206 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC27.59■■■□□ 2.01
Col15a1O35206 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Col15a1O35206 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC27.59■■■□□ 2.01
Col15a1O35206 Gm6139-201ENSMUST00000079261 882 ntBASIC27.59■■■□□ 2.01
Col15a1O35206 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Col15a1O35206 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC27.58■■■□□ 2.01
Col15a1O35206 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Col15a1O35206 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Col15a1O35206 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Col15a1O35206 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Col15a1O35206 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Col15a1O35206 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Col15a1O35206 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Col15a1O35206 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC27.57■■■□□ 2
Col15a1O35206 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
Col15a1O35206 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
Col15a1O35206 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Col15a1O35206 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Col15a1O35206 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC27.56■■■□□ 2
Col15a1O35206 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Col15a1O35206 Slc35b2-207ENSMUST00000226086 850 ntBASIC27.55■■■□□ 2
Col15a1O35206 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC27.55■■■□□ 2
Col15a1O35206 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Col15a1O35206 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms