Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcna-ps2A0A140T8V5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcna-ps2A0A140T8V5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcna-ps2A0A140T8V5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.98
Pcna-ps2A0A140T8V5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.14■□□□□ 0.98
Pcna-ps2A0A140T8V5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcna-ps2A0A140T8V5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcna-ps2A0A140T8V5 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.14■□□□□ 0.97
Pcna-ps2A0A140T8V5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcna-ps2A0A140T8V5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcna-ps2A0A140T8V5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcna-ps2A0A140T8V5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcna-ps2A0A140T8V5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcna-ps2A0A140T8V5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcna-ps2A0A140T8V5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcna-ps2A0A140T8V5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcna-ps2A0A140T8V5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcna-ps2A0A140T8V5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcna-ps2A0A140T8V5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcna-ps2A0A140T8V5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pcna-ps2A0A140T8V5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcna-ps2A0A140T8V5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcna-ps2A0A140T8V5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.11■□□□□ 0.97
Pcna-ps2A0A140T8V5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.11■□□□□ 0.97
Pcna-ps2A0A140T8V5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcna-ps2A0A140T8V5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcna-ps2A0A140T8V5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcna-ps2A0A140T8V5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcna-ps2A0A140T8V5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Pcna-ps2A0A140T8V5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Pcna-ps2A0A140T8V5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcna-ps2A0A140T8V5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcna-ps2A0A140T8V5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Pcna-ps2A0A140T8V5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcna-ps2A0A140T8V5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcna-ps2A0A140T8V5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcna-ps2A0A140T8V5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcna-ps2A0A140T8V5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcna-ps2A0A140T8V5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcna-ps2A0A140T8V5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcna-ps2A0A140T8V5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcna-ps2A0A140T8V5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcna-ps2A0A140T8V5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcna-ps2A0A140T8V5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcna-ps2A0A140T8V5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcna-ps2A0A140T8V5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms