Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv16-104A0A0B4J1I1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv16-104A0A0B4J1I1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.78■■□□□ 1.08
Igkv16-104A0A0B4J1I1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv16-104A0A0B4J1I1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv16-104A0A0B4J1I1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.73■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.73■■□□□ 1.07
Igkv16-104A0A0B4J1I1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv16-104A0A0B4J1I1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.7■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.7■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.7■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Gm9870-201ENSMUST00000063874 645 ntBASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv16-104A0A0B4J1I1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Igkv16-104A0A0B4J1I1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv16-104A0A0B4J1I1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv16-104A0A0B4J1I1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv16-104A0A0B4J1I1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv16-104A0A0B4J1I1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv16-104A0A0B4J1I1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv16-104A0A0B4J1I1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms