Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv20A0A0B4J1H5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trbv20A0A0B4J1H5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv20A0A0B4J1H5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.96■□□□□ 0.63
Trbv20A0A0B4J1H5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv20A0A0B4J1H5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.95■□□□□ 0.62
Trbv20A0A0B4J1H5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv20A0A0B4J1H5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv20A0A0B4J1H5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.95■□□□□ 0.62
Trbv20A0A0B4J1H5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv20A0A0B4J1H5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv20A0A0B4J1H5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv20A0A0B4J1H5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv20A0A0B4J1H5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv20A0A0B4J1H5 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv20A0A0B4J1H5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trbv20A0A0B4J1H5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv20A0A0B4J1H5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trbv20A0A0B4J1H5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Mir3960-201ENSMUST00000198213 73 ntBASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv20A0A0B4J1H5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv20A0A0B4J1H5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv20A0A0B4J1H5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv20A0A0B4J1H5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv20A0A0B4J1H5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.89■□□□□ 0.61
Trbv20A0A0B4J1H5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.89■□□□□ 0.61
Trbv20A0A0B4J1H5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv20A0A0B4J1H5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv20A0A0B4J1H5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Trbv20A0A0B4J1H5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv20A0A0B4J1H5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv20A0A0B4J1H5 Iqck-206ENSMUST00000208658 2891 ntBASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv20A0A0B4J1H5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 Gm45364-201ENSMUST00000210883 159 ntBASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv20A0A0B4J1H5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trbv20A0A0B4J1H5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv20A0A0B4J1H5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms