Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Ighv3-3A0A0A6YWL2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.46■□□□□ 0.07
Ighv3-3A0A0A6YWL2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Cap2-205ENSMUST00000225824 1634 ntBASIC15.44■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv3-3A0A0A6YWL2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms