Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12-3A0A075B648 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12-3A0A075B648 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12-3A0A075B648 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav12-3A0A075B648 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12-3A0A075B648 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12-3A0A075B648 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12-3A0A075B648 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav12-3A0A075B648 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12-3A0A075B648 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav12-3A0A075B648 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav12-3A0A075B648 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12-3A0A075B648 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12-3A0A075B648 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav12-3A0A075B648 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12-3A0A075B648 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12-3A0A075B648 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trav12-3A0A075B648 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav12-3A0A075B648 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav12-3A0A075B648 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav12-3A0A075B648 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav12-3A0A075B648 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-3A0A075B648 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-3A0A075B648 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-3A0A075B648 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-3A0A075B648 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav12-3A0A075B648 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.4■□□□□ 0.06
Trav12-3A0A075B648 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav12-3A0A075B648 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-3A0A075B648 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-3A0A075B648 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-3A0A075B648 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-3A0A075B648 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-3A0A075B648 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav12-3A0A075B648 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav12-3A0A075B648 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms