Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9-1A0A075B601 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.49■□□□□ 0.23
Trav9-1A0A075B601 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9-1A0A075B601 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9-1A0A075B601 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav9-1A0A075B601 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-1A0A075B601 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-1A0A075B601 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav9-1A0A075B601 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9-1A0A075B601 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav9-1A0A075B601 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9-1A0A075B601 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trav9-1A0A075B601 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9-1A0A075B601 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9-1A0A075B601 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9-1A0A075B601 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav9-1A0A075B601 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav9-1A0A075B601 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav9-1A0A075B601 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-1A0A075B601 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-1A0A075B601 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9-1A0A075B601 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9-1A0A075B601 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9-1A0A075B601 Gm14523-201ENSMUST00000117260 558 ntBASIC16.44■□□□□ 0.22
Trav9-1A0A075B601 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9-1A0A075B601 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9-1A0A075B601 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9-1A0A075B601 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.43■□□□□ 0.22
Trav9-1A0A075B601 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Gm7332-201ENSMUST00000118351 454 ntBASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9-1A0A075B601 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9-1A0A075B601 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav9-1A0A075B601 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
Trav9-1A0A075B601 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9-1A0A075B601 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms