Protein–RNA interactions for Protein: P62878

Rbx1, E3 ubiquitin-protein ligase RBX1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbx1P62878 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rbx1P62878 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rbx1P62878 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rbx1P62878 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rbx1P62878 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rbx1P62878 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rbx1P62878 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rbx1P62878 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbx1P62878 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbx1P62878 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rbx1P62878 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rbx1P62878 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbx1P62878 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbx1P62878 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rbx1P62878 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.66■□□□□ 0.74
Rbx1P62878 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rbx1P62878 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rbx1P62878 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rbx1P62878 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rbx1P62878 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rbx1P62878 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbx1P62878 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbx1P62878 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rbx1P62878 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rbx1P62878 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rbx1P62878 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.52■□□□□ 0.72
Rbx1P62878 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Rbx1P62878 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rbx1P62878 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rbx1P62878 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbx1P62878 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbx1P62878 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.45■□□□□ 0.7
Rbx1P62878 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbx1P62878 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbx1P62878 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbx1P62878 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rbx1P62878 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbx1P62878 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbx1P62878 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.4■□□□□ 0.7
Rbx1P62878 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
Rbx1P62878 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbx1P62878 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rbx1P62878 Gm27325-201ENSMUST00000175467 74 ntBASIC19.36■□□□□ 0.69
Rbx1P62878 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbx1P62878 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rbx1P62878 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbx1P62878 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbx1P62878 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rbx1P62878 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbx1P62878 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rbx1P62878 Gm25238-201ENSMUST00000174914 89 ntBASIC19.29■□□□□ 0.68
Rbx1P62878 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbx1P62878 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Rbx1P62878 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Rbx1P62878 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.26■□□□□ 0.67
Rbx1P62878 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbx1P62878 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rbx1P62878 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbx1P62878 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbx1P62878 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbx1P62878 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rbx1P62878 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rbx1P62878 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.23■□□□□ 0.67
Rbx1P62878 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Rbx1P62878 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbx1P62878 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rbx1P62878 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rbx1P62878 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rbx1P62878 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rbx1P62878 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.16■□□□□ 0.66
Rbx1P62878 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rbx1P62878 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbx1P62878 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbx1P62878 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rbx1P62878 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rbx1P62878 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rbx1P62878 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rbx1P62878 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rbx1P62878 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rbx1P62878 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rbx1P62878 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rbx1P62878 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rbx1P62878 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rbx1P62878 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rbx1P62878 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rbx1P62878 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rbx1P62878 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rbx1P62878 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rbx1P62878 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rbx1P62878 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Rbx1P62878 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rbx1P62878 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rbx1P62878 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rbx1P62878 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rbx1P62878 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Rbx1P62878 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbx1P62878 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbx1P62878 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Rbx1P62878 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rbx1P62878 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms