Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Gm6266-201ENSMUST00000203844 806 ntBASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Gm32025-201ENSMUST00000217960 307 ntBASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gm5538W4VSP6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Gm27682-201ENSMUST00000183930 110 ntBASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Gm37042-201ENSMUST00000193816 581 ntBASIC13.19□□□□□ -0.3
Gm5538W4VSP6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.19□□□□□ -0.3
Gm5538W4VSP6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Gm17208-201ENSMUST00000168388 535 ntBASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Gm22121-201ENSMUST00000175148 54 ntBASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.18□□□□□ -0.3
Gm5538W4VSP6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm5538W4VSP6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm5538W4VSP6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm5538W4VSP6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm5538W4VSP6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gm5538W4VSP6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm5538W4VSP6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm5538W4VSP6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms