Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cldn9Q9Z0S7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cldn9Q9Z0S7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldn9Q9Z0S7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Gm10156-201ENSMUST00000122364 462 ntBASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Gm8598-201ENSMUST00000221184 836 ntBASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cldn9Q9Z0S7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms