Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm8213-201ENSMUST00000118191 441 ntBASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Prpf40aQ9R1C7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm5745-201ENSMUST00000183748 313 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm5035-201ENSMUST00000215581 927 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf40aQ9R1C7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Gm14350-201ENSMUST00000116642 640 ntBASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Gm16202-201ENSMUST00000117532 544 ntBASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf40aQ9R1C7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Gm10156-201ENSMUST00000122364 462 ntBASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf40aQ9R1C7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms