Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Gm14585-201ENSMUST00000120713 634 ntBASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Gm3150-201ENSMUST00000166418 204 ntBASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Mir6923-201ENSMUST00000184592 72 ntBASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a4Q9QZR9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm15036-201ENSMUST00000118880 400 ntBASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm42779-201ENSMUST00000198807 406 ntBASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm5705-201ENSMUST00000066241 711 ntBASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm29410-201ENSMUST00000188383 694 ntBASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a4Q9QZR9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a4Q9QZR9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms