Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smco4Q9JIS3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gm5682-201ENSMUST00000173402 505 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gm27741-201ENSMUST00000185060 237 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.32□□□□□ -0.76
Smco4Q9JIS3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gm11764-201ENSMUST00000120221 623 ntBASIC10.31□□□□□ -0.76
Smco4Q9JIS3 AA414768-201ENSMUST00000121924 1257 ntBASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gm5479-201ENSMUST00000160578 435 ntBASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gm19184-201ENSMUST00000196798 928 ntBASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gm45841-201ENSMUST00000207700 164 ntBASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.31□□□□□ -0.76
Smco4Q9JIS3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms