Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.43□□□□□ -0.42
Ube4bQ9ES00 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm13015-201ENSMUST00000118674 204 ntBASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm13823-201ENSMUST00000119930 345 ntBASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm44335-201ENSMUST00000196879 141 ntBASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm44297-201ENSMUST00000198304 141 ntBASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm44346-201ENSMUST00000198851 141 ntBASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ube4bQ9ES00 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm22065-201ENSMUST00000103753 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm22066-201ENSMUST00000103761 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm24932-201ENSMUST00000103763 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm24115-201ENSMUST00000103799 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm22190-201ENSMUST00000103827 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm22191-201ENSMUST00000103831 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm24721-201ENSMUST00000103849 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm28018-201ENSMUST00000103869 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Gm26399-201ENSMUST00000103937 110 ntBASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.41□□□□□ -0.42
Ube4bQ9ES00 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms