Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Gm7287-201ENSMUST00000205267 602 ntBASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpne8Q9DC53 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpne8Q9DC53 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Gm11618-201ENSMUST00000117946 267 ntBASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Gm13369-201ENSMUST00000119442 987 ntBASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpne8Q9DC53 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Cpne8Q9DC53 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms