Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Gm2991-201ENSMUST00000173338 480 ntBASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Mospd4-201ENSMUST00000180618 576 ntBASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Gm27243-201ENSMUST00000183964 521 ntBASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Gm38341-201ENSMUST00000195357 515 ntBASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Gm43758-201ENSMUST00000199500 367 ntBASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Gm5781-201ENSMUST00000219792 443 ntBASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rsph3bQ9DA80 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.21□□□□□ -0.14
Rsph3bQ9DA80 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rsph3bQ9DA80 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rsph3bQ9DA80 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Rsph3bQ9DA80 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rsph3bQ9DA80 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rsph3bQ9DA80 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rsph3bQ9DA80 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gm8738-201ENSMUST00000172606 329 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gm45865-201ENSMUST00000211815 945 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gm8227-201ENSMUST00000223306 571 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rsph3bQ9DA80 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Gm4986-201ENSMUST00000119731 549 ntBASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Gm12502-201ENSMUST00000120197 444 ntBASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 Mir7221-201ENSMUST00000184009 72 ntBASIC14.19□□□□□ -0.14
Rsph3bQ9DA80 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms